AI in Microscopy: A BioImaging Guide

Welcome

AI in Microscopy is an interactive online textbook intended to introduce biologists and microscopists to the fundamentals of artificial intelligence and machine learning.

The table of contents on the left can be used to navigate the book. Subsections of each chapter appear as a clickable menu on the right side of each chapter page. Key terms in each chapter are highlighted as links to the Glossary page. The upper left menu contains a toggle for using the website in dark mode.

A free PDF of the textbook can be downloaded from the upper left menu. Note that this PDF lacks some of the functionality of the online interactive book.

The source code for this textbook is available on GitHub. All content is licensed under BSD 3-Clause, except where noted otherwise.

AI Disclosure

Anthropic’s Claude (Sonnet 5 and Sonnet 5.5) assisted in identifying broken links, proof reading, and developing formatting solutions for this book. All content was reviewed, revised, and verified by the human editors and authors, who take full responsibility for the final text.